2021 – Poster Session

Please check out the Symposium Program for more details.


=   Selected for a short talk

Presenter Name Poster Title
Emma Accorsi Determinants of Staphylococcus aureus carriage in the developing infant nasal microbiome

Emma K. Accorsi, Eric A. Franzosa, Tiffany Hsu, Regina Joice Cordy, Ayala Maayan-Metzger, Hanaa Jaber, Aylana Reiss-Mandel, Casey DuLong, Marc Lipsitch, Gili Regev-Yochay, Curtis Huttenhower

 

Abigail Armstrong

Saliva microbiome collection and processing methods

Abigail JS Armstrong, Veenat Parmar, Martin J Blaser

 

 

Ye-Ji Bang

Microbiota-induced vitamin A mobilization by serum amyloid A and its role in intestinal immunity

Ye-Ji Bang, Zehan Hu, Yun Li, Sureka Gattu, Kelly A. Ruhn, Joachim Herz, and Lora V. Hooper

 

Amrisha Bhosle

Prioritization and Annotation of Novel Bioactive Small Molecules from the Microbiome

Amrisha Bhosle, Sena Bae, Yancong Zhang, Eunyong Chun, Julian Avila-Pacheco, Ludwig Geistlinger, Levi Waldron, Clary Clish, Ramnik Xavier, Hera Vlamakis, Eric A. Franzosa, Wendy S. Garrett, Curtis Huttenhower

 

 

Marissa Bivins

Discovery of the Gut Microbial Enzymes that Drive the Dose-Limiting Toxicity of the Immunosuppressant Mycophenolate Mofetil

Marissa M. Bivins, Lindsay E. Bass, Amanda L. Graboski, Michelle E. Fiamingo, Rebecca L. Johnson, Joshua B. Simpson,William G. Walton, Nathan I. Nicely, John R. Lee, Matthew R. Redinbo

 

Asker Brejnrod

Discovering antibiotics by integrating microbiome and metabolome data via high dimensional mediation analysis

Brejnrod A, Qing Fang, Manimozhiyan Arumugam, Pieter Dorrestein

 

 

Matthew Brock

16S sequencing on pediatric blood detects DNA signatures of commensals and pathogenic microbes that correlate with clinical features

Matthew Brock, Bo Zhang, Patricia Pichilingue-Reto, Carlos Arana, Lora Hooper, Nicolai S.C. van Oers and Prithvi Raj

 

 

 

Andrew Brooks

Pre-symptomatic detection of COVID-19 from smartwatch data

Tejaswini Mishra*, Meng Wang*, Ahmed A Metwally*, Gireesh K Bogu*, Andrew W Brooks*, Amir Bahmani*, Arash Alavi*, Alessandra Celli, Emily Higgs, Orit Dagan-Rosenfeld, Bethany Fay, Susan Kirkpatrick, Ryan Kellogg, Michelle Gibson, Tao Wang, Erika M Hunting, Petra Mamic, Ariel B Ganz, Benjamin Rolnik, Xiao Li**, Michael P Snyder**

 

Jennifer Dawkins

Gut metabolites predict Clostridioides difficile recurrence

Jennifer J. Dawkins, Jessica R. Allegretti, Travis E. Gibson, Lynn Bry, Georg K. Gerber

 

 

Anders Dohlman

The Cancer Microbiome Atlas (TCMA): A Resource for Querying Host-Microbe Interactions

Anders B. Dohlman, Diana Arguijo, Shengli Ding, Michael Gao, Holly Dressman, Iliyan D. Iliev, Steven M. Lipkin, Xiling Shen

 

 

Eric Franzosa

Integrating taxonomic, functional, and strain profiling of microbial communities with bioBakery 3

F. Beghini, L.J. McIver, A. Blanco-Míguez, L. Dubois, F. Asnicar, S. Maharjan, A. Mailyan, A.M. Thomas,P. Manghi, M. Valles-Colomer, G. Weingart, Y. Zhang, M. Zolfo, C. Huttenhower, E.A. Franzosa, N. Segata

 

 

Leah Froehle

CD8+ T Cells Mediate Colon Epithelial Cell Death in an Organoid Model of HIV Pathogenesis

Upasana Das Adhikari, Leah M. Froehle, Alice H. Linder, Muntsa Rocafort Junca, Mark S. Ladinsky, and Douglas S. Kwon

 

 

Andrew Ghazi

High-sensitivity pattern discovery in large, paired multi-omic datasets with HAllA

Andrew R. Ghazi, Kathleen Sucipto, Gholamali Rahnavard, Eric A. Franzosa, Lauren J. McIver, Jason Lloyd-
Price, Emma Schwager, George Weingart, Yo Sup Moon, Xochitl C. Morgan, Levi Waldron, Curtis Huttenhower

 

 

Isabella Goodchild-Michelman

Reconstruction of metagenome-scale models of the gut microbiota metabolism at species-level resolution in Inflammatory Bowel Disease

Isabella M. Goodchild-Michelman, Analeigha V. Colarusso, Ali R. Zomorrodi

 

Danting Jiang

Uncovering the role of gut microbiota in HIV acquisition and vaccine response in infant monkeys

Danting Jiang and Neil Surana

 

 

 

 

 

 

Shelley Kalaora

Identification of microbial-derived HLA-bound peptides in melanoma

Shelly Kalaora, Adi Nagler, Deborah Nejman, Michal Alon, Chaya Barbolin, Eilon Barnea, Steven L. C. Ketelaars, Kuoyuan Cheng, Kevin Vervier, Noam Shental, Yuval Bussi, Ron Rotkopf, Ronen Levy, Gil Benedek, Sophie Trabish, Tali Dadosh, Smadar Levin-Zaidman, Leore T. Geller, Kun Wang, Polina Greenberg, Gal Yagel, Aviyah Peri, Garold Fuks, Neerupma Bhardwaj, Alexandre Reuben, Leandro Hermida, Sarah B. Johnson, Jessica R. Galloway-Peña, William C. Shropshire, Chantale Bernatchez,
Cara Haymaker, Reetakshi Arora, Lior Roitman, Raya Eilam, Adina Weinberger, Maya Lotan-Pompan, Michal Lotem, Arie Admon, Yishai Levin, Trevor D. Lawley, David J. Adams, Mitchell P. Levesque, Michal J. Besser, Jacob Schachter, Ofra Golani, Eran Segal, Naama Geva-Zatorsky, Eytan Ruppin, Pia Kvistborg, Scott N. Peterson, Jennifer A. Wargo, Ravid Straussman & Yardena Samuels

 

 

Maddy Kline

Characterization of a novel microbiome marker anti-correlated with Staphylococcus aureus carriage in the infant nasal microbiome

Madeleine C. Kline, Emma K. Accorsi, Eric A. Franzosa, Curtis Huttenhower

 

Peter Larson

Instability, Heterogeneity, and Pathogenicity Reservoirs in the Skin, Oral, and Gut Microbiota of Older Adults

Peter Larson, George Kuchel MD, James Grady PhD, Julie Robison PhD, Julia Oh PhD

 

 

Giovana Leite

Probiotic Supplementation and Marathon Runners: there are any effect up to Gut Microbiota and neutrophil function?

Geovana S F Leite, Ayane S Resende, Edgar Tavares, Helena A P Batatinha, Ricardo A Fock, José C R Neto, Ronaldo V T dos Santos, Antonio H Lancha Junior

 

Chengchen Li

The Microbiome Collection Core at the Harvard T.H. Chan School of Public Health (HCMCC)

Chengchen Li, Jeremy E. Wilkinson, Curtis Huttenhower

 

Venkata Suhas Maranganti

A Fast and Accurate Machine Learning of Human Interpretable Rules Predicting Host Status from Microbiome Dynamics

Venkata Suhas Maringanti, Vanni Bucci, Georg K. Gerber

 

 

Yuka Moroishi

Infant Gut Microbiome and Infections and Symptoms: A Prospective Cohort Study

Yuka Moroishi, Jiang Gui, Anne G. Hoen, Hilary G. Morrison, Emily R. Baker, Kari Nadeau,Hongzhe Li, Zhigang Li, Juliette Madan, Margaret R. Karagas

 

Quang Nguyen

cILR: Taxonomic Enrichment Analysis with Isometric Log Ratios

Quang Nguyen, Anne G. Hoen, H. Robert Frost

 

Emese O’Donnell

Intestinal inflammation leads to changes in the blood PBMC and plasma microbiome

Emese Prandovszky O’Donnell, Hua Liu, Emily G. Severance, Faith Dickerson, Robert H. Yolken

 

Daniel Radford-Smith

Maternal probiotic intake during obesity ameliorates depressive-like behaviour and alters the gut-brain axis in adult offspring

Radford-Smith DE., Probert F., Burnet PWJ. & Anthony DC.

 

Meghan Short

Power and sample size calculation for microbiome epidemiology

Meghan I. Short, Emma Schwager, Siyuan Ma, Lauren McIver, Jeremy E. Wilkinson, Eric A. Franzosa, Curtis Huttenhower

 

Apollo Stacy

Infection trains the host for microbiota-enhanced resistance to pathogens

Apollo Stacy, Vinicius Andrade-Oliveira, John A. McCulloch, Benedikt Hild, Ji Hoon Oh, P. Juliana Perez-Chaparro, Choon K. Sim, Ai Ing Lim, Verena M. Link, Michel Enamorado, Giorgio Trinchieri, Julia A. Segre, Barbara Rehermann, Yasmine Belkaid

 

Jotham Suez

Probiotics alter the antibiotic resistance gene reservoir along the human GI tract

Emmanuel Montassier, Rafael Valdés-Mas, Eric Batard, Niv Zmora, Mally Dori-Bachash, Jotham Suez, Eran Elinav

 

 

Edgar Tavares-Silva

Probiotic Supplementation Increase Monocyte’s Function and Maintain Gut Microbiota Alpha Diversity of Marathon Runners

Edgar Tavares-Silva, Geovana S F Leite, Helena A P Batatinha, Ayane S Resende, Antônio H Lancha Junior, José C R Neto, Ronaldo V Thomatieli-Santos.

 

 

 

Kelsey Thompson

The gut microbiome in juvenile idiopathic arthritis

Kelsey N Thompson, Kevin S Bonham,Elizabeth C Rosser, Emma Robinson, Emma Jordan, Fatema Jeralii, Hannah Peckham, Nicholas E Ilott, Lilian H Lam, Paula Colmenero, Sam J Bullers, the Inflammatory Arthritis Microbiome Consortium, Coziana Ciurtin, Lucy R Wedderburn, Fiona Powrie, and Curtis Huttenhower

 

 

Liisa Veerus

Evolutionary Implications of Reproductive Tract Microbiota in the Polygynandrous Red Junglefowl (Gallus gallus)

Liisa Veerus, Allison M. Roth, Yunke Wang, Shorok B. Mombrikotb, Emma Ransome, Rosie Eccleston, Thomas Bell, Tommaso Pizzari

 

 

Aaron Walsh

The role of host genetics in the development of the infant gut microbiome

Aaron M. Walsh, Tommi Vatanen, George Weingart, Mondher Khidiri, Kendra Vehik, Eric A. Franzosa, and Curtis Huttenhower

 

 

Kai Wang

The modulating role of the gut microbiome in body weight responses to physical activity

K. Wang, W. Ma, LH. Nguyen, D. Wang, RS. Mehta, D. Hang, L. Al-Shaar, CH. Pernar, CH. Lo, B. Fu, S. Ogino, EB. Rimm, FB. Hu, WS. Garrett, Q. Sun, AT. Chan, C. Huttenhower, M. Song

 

 

Ya Lea Wang

Characterizing microbial community viability with RNA-based high-throughput sequencing

Ya Wang,Yan Yan, Kelsey N. Thompson, Sena Bae, Jiaxian Shen,Hera Vlamakis, Erica M. Hartman, Curtis Huttenhower

 

Jeremy Wilkinson

The Harvard T.H. Chan School of Public Health Microbiome Analysis Core

Jeremy E. Wilkinson, Lauren J. McIver, Chengchen Li, Thomas M. Kuntz, Curtis Huttenhower

 

 

Yan Yan

Identifying strain-specific functional genes in colorectal cancer

Yan Yan, Andrew M. Thomas, Kelsey N. Thompson, Paolo Manghi, Lauren J. Mciver, Eric A. Franzosa, Nicola Segata, Andrew T. Chan, Wendy S. Garrett, Curtis Huttenhower

 

 

Yue Sandra Yin

Deletion of innate effector serum amyloid A alters gut microbiome and drives metabolism in mice

Yue Sandra Yin, Laura J. den Hartigh, Xue-Song Zhang, Shari Wang, Zhan Gao, Abigail Armstrong, Jincheng Wang, Maria Gloria Dominguez-Bello, Martin J. Blaser

Caroline Young

The colorectal cancer-associated microbiome
 

 

Lufei Young

A cross-link between dietary sodium, gut microbiome, and heart failure

Yue Sandra Yin, Laura J. den Hartigh, Xue-Song Zhang, Shari Wang, Zhan Gao, Abigail Armstrong, Jincheng Wang, Maria Gloria Dominguez-Bello, Martin J. Blaser

 

 

 

Yancong Zhang

Identifying Novel Bioactive Microbial Gene Products in Inflammatory Bowel Disease

Yancong Zhang, Amrisha Bhosle, Sena Bae, Lauren J. Mclver, Emma Accorsi, Kelsey N. Thompson, Cesar Arze, Ya Wang, Ayshwarya Subramanian, Damian R. Plichita, Ali Rahnavard, Afrah Shafquat , Ramnik J. Xavier, Hera Vlamakis, Wendy S. Garrett, Andy Krueger , Curtis Huttenhower, Eric A. Franzosa