Poster Session 2023

Please check out the Symposium Program for more details.


=   Selected for a short talk

 

Presenter Name Poster Title
 

Amanda Adams

 

Bacteria-virus interactions in the vaginal microbiome reduce herpes virus infectivity

Amanda Adams, Smita Gopinath

 

Amrisha Bhosle

 

Response of the gut microbiome and metabolome to dietary fiber in healthy dogs

Amrisha Bhosle, Matthew I. Jackson, Aaron Walsh, Eric A. Franzosa, Curtis Huttenhower, Dayakar V. Badri

 

Tobyn Branck

 

A comprehensive profile of the companion animal gut microbiome integrating reference-based and reference-free methods 

Tobyn Branck, Zhiji Hu, William A. Nickols, Aaron M. Walsh, Amrisha Bhosle, Meghan I. Short, Jacob Nearing, Artemis Louyakis, Dayakar V. Badri, Christoph Brockel, Kelsey N. Thompson, Curtis Huttenhower

 

Ivan Duran

 

Using machine learning and multi-omics longitudinal microbiome data for the early prediction of disease development

Ivan Duran, Arnav Srivastava, Maureen M. Leonard, Alessio Fasano, Ali R. Zomorrodi

 

Haley Gause

 


Cross-kingdom Interactions between
Candida albicans and Enterococcus faecalis in the Gut MicrobiomeHaley Gause, UCSF, Johnson Lab
 

Sarah Gayer

 

Elements of the lean gut environment protect against severe atopic dermatitis in high fat diet-fed mice

Sarah Gayer, Vaibhav Upadhyay, Owen Jiang, ARum Yoo, Chihiro Tabuchi, Margaret Alexander, Christine Olson, Kyle Spitler, Connie Ha, Moriah Sandy, Laura Dwyer, Jessie Turnbaugh, Tiffany Scharschmidt, Peter Turnbaugh, Sagar Bapat

 

Andrew Ghazi

 

Quantifying Microbial Strain-Host Associations with ANPAN 

Andrew R. Ghazi, Yan Yan, Kelsey N. Thompson, Zhendong Mei, Amrisha Bhosle, Fenglei Wang, Kai Wang, Eric A. Franzosa, Curtis Huttenhower

 

Isabella Goodchild-Michelman

 


Investigating the Effects of Probiotic Treatment on the Gut Microbiome in Preterm Infants
Isabella (Izzy) Goodchild-Michelman , Shirin Moossavi, Marie-Claire Arrieta, Emily Mercer, Ali Zomorrodi
 

 

Amanda Graboski

 

Discovery and Characterization of a Gut Microbial Tryptophanase Inhibitor to Ameliorate Chronic Kidney Disease

Amanda L. Graboski1, Mark E. Kowalewski2, Joshua B. Simpson2, Matthew R. Redinbo2

 

 

 

Yordan Hodzhev

What does the ratio between blood bacterial and fungal microbiome abundance tell us about fungal-bacterial interactions?

Yordan Hodzhev, Borislava Tsafarova, Vladimir Tolchkov, Reni Kalfin, Stefan Panaiotov
 

Katie Hsia

DIFFERENTIAL ABUNDANCE OF THE FUNGAL MICROBIOME IN PATIENTS WITH ULCERATIVE COLITIS


Katie Hsia, Laleh Montaser Kouhsari, Khalid Algarrahi, May Fu, Naisi Zhao, Hannah Chen, Dominique Michaud, Sushrut Jangi

 

Jordan Jensen

Integrating reference- and assembly-based methods for improved viral identification from metagenomes, metatranscriptomes, and viromes


Jordan Jensen, Ya Wang, Moreno Zolfo, Philipp C. Münch, Nicola Segata, Eric A. Franzosa, Curtis Huttenhower

 

Shanlin Ke


Dissecting the Role of the Human Microbiome in COVID-19 via Metagenome-assembled Genomes


Shanlin Ke
, Scott T. Weiss, Yang-Yu Liu
 

Gavin Kuziel

 

Functional diversification of plant small molecules by the gut microbiome

Gavin A Kuziel, Gabriel L Lozano, John Manion, Corina Simian, Emmanuel Stephen-Victor, Talal Chatila, Min Dong, Jing-Ke Weng, Seth Rakoff-Nahoum

 

 

Abigail Lind

 

 

Genetic diversity of commensal Blastocystis gut protists reveals strain-specific changes in host-interfacing pathways


Abigail L. Lind, Ami S. Bhatt, Katherine S. Pollard

 

Steven Medina

 


The Harvard Chan Microbiome Collection Core

Steven Medina, Curtis Huttenhower
 

 

Mahsa Monshizadeh

 

 

Incorporating metabolic activity, taxonomy, and community structure to improve microbiome-based predictive models for host phenotype prediction


Mahsa Monshizadeh, Yuzhen Ye

 

 

Xochitl Morgan

 

The Harvard Chan Microbiome Analysis Core
Xochitl C. Morgan, Lauren J. McIver, Thomas Kuntz, Curtis Huttenhower
 

Jacob Nearing

 

Gut microbiome-metabolome interactions during ketogenic diets of varied composition
Jacob T. Nearing, Kelsey N Thompson, Amrisha Bhosle, Veronica Perdomo, William A. Nickols, Tobyn Branck, Christoph Brockel, Dayakar Badri, Curtis Huttenhower, Matthew Jackson
 

Etienne Nzabarushimana

 

The landscape of novel lateral gene transfer events in the human microbiome
Etienne Nzabarushimana, Tiffany Y. Hsu, Dennis Wong, Chengwei Luo, Robert G. Beiko, Morgan Langille, Curtis Huttenhower, Long H. Nguyen, Eric A. Franzosa
 

Diana Proctor

 

 

Candida auris and the great ESKAPE: the skin as a reservoir for multi-drug resistance and transmission


Diana M Proctor, Thomas Karl Atkins, Sarah E Sansom, Mary K Hayden, Julia A Segre

 

 

Chatpol (Jamie) Samuthpongtorn

 

THE ROLE OF THE GUT MICROBIOME IN THE ASSOCIATION BETWEEN CITRUS FRUIT AND RISK OF DEPRESSION


Chatpol Samuthpongtorn, Allison Chan, Wenjie Ma, Fenglei Wang, Long H. Nguyen, Dong D. Wang, Olivia I. Okereke, Curtis Huttenhower, Andrew T. Chan, Raaj S. Mehta

 

 

Prioty Sarwar

 

HMO-metabolizing bacteria in the gut microbiome of infants with atopic dermatitis/eczema

Prioty Sarwar, Deniz Uzun, Vanja Klepac-Ceraj

 

 

Zeyang Shen

 

 

A genome catalog of the early-life human skin microbiome

Zeyang Shen, Pamela A. Frischmeyer-Guerrerio, VITALITY team, Julia A. Segre

 

 

 

Kelsey Thompson

 

Identifying strain-specific associations in colorectal cancer

Kelsey N. Thompson, Andrew Ghazi, Gianmarco Piccinno, Yan Yan, Andrew M. Thomas, Long H. Nguyen, Lior Lobel, Paolo Manghi, Lauren J. Mciver, Emma Accorsi, Eric A. Franzosa, Francesco Asnicar, Andrew T. Chan, Wendy S. Garrett, Nicola Segata, Curtis Huttenhower

 

A.Delphine Tripp

 

 

C. acnes phage predation in the healthy human skin microbiome

A. Delphine Tripp, Tami D. Lieberman

 

Emily Van Syoc

 

 

Mining metagenomes reveals gut mycobiome alterations with metformin and type 2 diabetes mellitus

Emily Van Syoc, Michelle Nixon, Justin D. Silverman, Connie J. Rogers, Frank Gonzalez, Luo Yuhong, Ilze Elbere, Janis Klovins, Andrew Patterson, and Erika Ganda

 

 

Ya Lea Wang

 

 

Scalable virome enrichment methods for community detection and quantification

Ya Wang, Jordan Jensen, Kelsey N. Thompson, Eric Franzosa, Seth Rakoff-Nahoum, Erica M. Hartmann,  Curtis Huttenhower 

 

An-Ni Zhang

 


CRISPR spacer acquisition is a rare event in human gut microbiome

Anni Zhang, Department of Biological Engineering, MIT
 

Yancong Zhang


Predicting functions of uncharacterized gene products in microbial communities

Yancong Zhang, Amrisha Bhosle, Sena Bae, Kelly Eckenrode, Xueying (Sonia) Huang, Jingjing Tang, Danylo Lavrentovich, Lana Awad, Ji Hua, Xochitl C. Morgan, Andy Krueger, Wendy S. Garrett1, Eric A. Franzosa, Curtis Huttenhower

 

 


Thanks to our sponsors:

Corundum Systems Biology (CSB)